Saturday, September 28, 2013

Biotech Project Selection 2013/2014

Mushroom project
We have decided to do mushroom growing again due to the many benefits it has in spite of the many failures we have had in all the previous trials. We are determined this time round to see at least one mushroom body fruit because we are prepared to take extreme care by putting into consideration the challenges we encountered before.
We realize that we the Biotechnologists are the ones to help improve conditions under which mushrooms and other related foods are grown to gain much more yields but we can achieve this, if we have no practical feel of it and more so we cannot get motivated to research how to improve the yield when we do not know how good it is to earn from this kind of work.

Soap making
Our theme this academic year in Biotech and Research Club is “getting thoroughly equipped for job creation”. We therefore have selected soap making to be one of our projects we are going to run this year because it supports or theme.

Making pellets feeds for fish and rabbit and designing a computer program for it
Having realized the growing demand for fish and rabbit feeds in form of pellets in the country, the club has found it important to venture into the activity of making the pellets. We believe that it is going to be a big foundation for scientific research at Kyambogo University after the members have gained the basic knowledge of making this kind of feeds. After designing a well-balanced recipe for our feeds, we plan to write a computer program me in corroboration with the IT students that will always help us to calculate the ratios reflected in our designed recipe and any other standard recipe that we may find better than the one we will have formed. In other words for example if one has an ingredient containing a specific food value and he has its weight but does not know the corresponding masses of other ingredients that he should mix, our program will be able to help him figure out what mass of which ingredient he is supposed to mix on which scale of production.

Ecology of Kyambogo project

This project has been carried forward from the previous academic year because it was half way done. We therefore believe it will be complete by the end of this academic year and a full report written. Since a little work is left for this project, we have added three other activities to it that will feel the remaining time of the year.

Thursday, September 12, 2013

Characteristics of Spent Mushroom Substrate

The typical composition of spent mushroom substrate fresh from a mushroom house will vary slightly. Since raw materials and other cultural practices change, each load of fresh spent substrate has a slightly different element and mineral analysis. Therefore the characteristics shown in Table I indicate a range of values for each component. Sometimes, fresh substrate is placed in fields for at least one winter season and then marketed as "weathered" mushroom soil. This aged material has slightly different characteristics because the microbial activity in the field will change the composition and texture. The salt content may change during the aging period. If you have any specific questions concerning characteristics of either fresh or aged spent substrate, please contact your local Cooperative Extension agent.

Wednesday, July 03, 2013

Respiration in the Human Body

The term respiration has two relatively distinct meanings in biology. First, respiration is the process by which an organism takes oxygen into its body and then releases carbon dioxide from its body. In this respect, respiration can be regarded as roughly equivalent to "breathing." In some cases, this meaning of the term is extended to mean the transfer of the oxygen from the lungs to the bloodstream and, eventually, into cells. On the other hand, it may refer to the release of carbon dioxide from cells into the bloodstream and, thence, to the lungs.
Words to Know
Aerobic respiration: Respiration that requires the presence of oxygen.
Anaerobic respiration: Respiration that does not require the presence of oxygen.
ATP (adenosine triphosphate): High-energy molecule that cells use to drive energy-requiring processes such as biosynthesis (the production of chemical compounds), growth, and movement.
Capillaries: Very thin blood vessels that join veins to arteries.
Diffusion: Random movement of molecules that leads to a net movement of molecules from a region of high concentration to a region of low concentration.
Fermentation: A chemical reaction by which carbohydrates, such as sugar, are converted into ethyl alcohol.
Gill: An organ used by some animals for breathing consisting of many specialized tissues with infoldings. It allows the animal to absorb oxygen dissolved in water and expel carbon dioxide to the water.
Glucose: also known as blood sugar, a simple sugar broken down in cells to produce energy.
Glycolysis: A series of chemical reactions that takes place in cells by which glucose is converted into pyruvate.
Hemoglobin: Blood protein that can bind with oxygen.
Lactic acid: Similar to lactate, a chemical compound formed in cells from pyruvate in the absence of oxygen.
Pyruvate: The simpler compound glucose is broken down into during the process of glycolysis.
Trachea: A tube used for breathing.
Second, respiration also refers to the chemical reactions that take place within cells by which food is "burned" and converted into carbon dioxide and water. In this respect, respiration is the reverse of photosynthesis, the chemical change that takes place in plants by which carbon dioxide and water are converted into complex organic compounds. To distinguish from the first meaning of respiration, this "burning" of foods is also referred to as aerobic respiration.
Respiration mechanisms
All animals have some mechanism for removing oxygen from the air and transmitting it into their bloodstreams. The same mechanism is used to expel carbon dioxide from the bloodstream into the surrounding environment. In many cases, a special organ is used, such as lungs, trachea, or gills. In the simplest of animals, oxygen and carbon dioxide are exchanged directly between the organism's bloodstream and the surrounding environment. Following are some of the mechanisms that animals have evolved to solve this problem.
Direct diffusion. In direct diffusion, oxygen passes from the environment through cells on the animal's surface and then into individual cells inside. Sponges, jellyfish, and terrestrial flatworms use this primitive method of respiration. These animals do not have special respiratory organs. Microbes, fungi, and plants all obtain the oxygen they use for cellular respiration by direct diffusion through their surfaces.
Diffusion into blood. In diffusion into the blood, oxygen passes through a moist layer of cells on the body surface. From there, it passes through capillary walls and into the blood stream. Once oxygen is in the blood, it moves throughout the body to different tissues and cells. This method also does not rely upon special respiratory organs and is thus quite primitive. However, it is somewhat more advanced than direct diffusion. Annelids (segmented worms) and amphibians use this method of respiration.
Tracheae. In tracheal respiration, air moves through openings in the body surface called spiracles. It then passes into special breathing tubes called tracheae (singular, trachea) that extend into the body. The tracheae divide into many small branches that are in contact with muscles and organs. In small insects, air moves into the tracheae simply by molecular motion. In large insects, body movements assist tracheal air movement. Insects and terrestrial arthropods (organisms with external skeletons) use this method of respiration.
Gills. Fish and other aquatic animals use gills for respiration. Gills are specialized tissues with many infoldings. Each gill is covered by a thin layer of cells and filled with blood capillaries. These capillaries take up oxygen dissolved in water and expel carbon dioxide dissolved in blood.
Lungs. Lungs are special organs in the body cavity composed of many small chambers filled with blood capillaries. After air enters the lungs, oxygen diffuses into the blood stream through the walls of these capillaries. It then moves from the lung capillaries to the different muscles and organs of the body. Humans and other mammals have lungs in which air moves in and out through the same pathway. In contrast, birds have more specialized lungs that use a mechanism called crosscurrent exchange. Crosscurrent exchange allows air to flow in one direction only, making for more efficient oxygen exchange.
Movement of gases through the body
In direct diffusion and tracheal systems, oxygen and carbon dioxide move back and forth directly between cells and the surrounding environment. In other systems, some mechanism is needed to carry these gases between cells and the outside environment. In animals with lungs or gills, oxygen is absorbed by the bloodstream, converted into an unstable (easily broken down) chemical compound, and then carried to cells. When the compound reaches a cell, it breaks down and releases the oxygen. The oxygen then passes into the cell.
In the reverse process, carbon dioxide is released from a cell into the bloodstream. There the carbon dioxide is used to form another unstable chemical compound, which is carried by the bloodstream back to the gills or lungs. At the end of this journey, the compound breaks down and releases the carbon dioxide to the surrounding environment.
Various animals use different substances to form these unstable compounds. In humans, for example, the substance is a compound known as hemoglobin. In the lungs, hemoglobin reacts with oxygen to form oxyhemoglobin. Oxyhemoglobin travels through the bloodstream to cells, where it breaks down to form hemoglobin and oxygen. The oxygen then passes into cells.
On the return trip, hemoglobin combines with carbon dioxide to form carbaminohemoglobin. In this (and other) forms, carbon dioxide is returned to the surrounding environment.
Animals other than humans use compounds other than hemoglobin for the transport of oxygen and carbon dioxide. Certain kinds of annelids (earthworms, various marine worms, and leeches), for example, contain a green blood protein called chlorocruorin that functions in the same way that hemoglobin does in humans.
Whatever substance is used, the compound it forms with oxygen and carbon dioxide must be unstable, it must break down easily. This property is essential if the oxygen and carbon dioxide are to be released easily at the end of their journeys into and out of cells, lungs, and gills.
Cellular respiration. Cellular respiration is a process by which the simple sugar glucose is oxidized (combined with oxygen) to form the energy-rich compound adenosine triphosphate (ATP). Glucose is produced in cells by the breakdown of more complex carbohydrates, including starch, cellulose, and complex sugars such as sucrose (cane or beet sugar) and fructose (fruit sugar). ATP is the compound used by cells to carry out most of their ordinary functions, such as production of new cell parts and chemicals, movement of compounds through cells and the body as a whole, and growth.
The overall chemical change that occurs in cellular respiration can be represented by a fairly simple chemical equation:
6C 12 + 6 O → 6 CO + 6 H O + 36 ATP
That equation says that six molecules of glucose (C 12 ) react with six molecules of oxygen (O ) to form six molecules of carbon dioxide (CO ), six molecules of water (H O) and 36 molecules of ATP.
Cellular respiration is, however, a great deal more complicated that this equation would suggest. In fact, nearly two dozen separate chemical reactions are involved in the overall conversion of glucose to carbon dioxide, water, and ATP. Those two dozens reactions can be grouped together into three major cycles: glycolysis, the citric acid (or Krebs) cycle, and the electron transport chain.
In glycolysis, glucose is broken down into a simpler compound known as pyruvate. Pyruvate, in turn, is converted in the citric acid cycle to a variety of energy-rich compounds, such as ATP and NADH (nicotinamide adenine dinucleotide). Finally, all of these energy-rich compounds are converted in the electron transport chain to ATP.
Anaerobic respiration. As the equation above indicates, cellular respiration usually requires the presence of oxygen and is, therefore, often known as aerobic (or "using oxygen") respiration. Another form of respiration is possible, one that does not make use of oxygen. That form of respiration is known as anaerobic (or "without oxygen") respiration.
Anaerobic respiration begins, as does aerobic respiration, with glycolysis. In the next step, however, pyruvate is not passed onto the citric acid cycle. Instead, it undergoes one of two other chemical reactions. In the first of these reactions, the pyruvate is converted to ethyl alcohol in a process known as fermentation. Fermentation is a well-known chemical reaction by which grapes, barley, rice, and other grains are used to make wine, beer, and other alcoholic beverages.
The second anaerobic reaction occurs when cells are unable to obtain oxygen by methods they normally use. For example, a person who exercises vigorously may not be able to inhale oxygen fast enough to meet the needs of his or her cells. (Glucose is used up faster than oxygen is supplied to the cells.) In that case, cells switch over to anaerobic respiration. They convert glucose to pyruvate and then to another chemical known as lactate or lactic acid (two forms of the same compound). As lactic acid begins to build up in cells, it causes an irritation similar to placing vinegar (acetic acid) in an open wound.
Most cells are able to switch from aerobic to anaerobic respiration when necessary. But they are generally not able to continue producing energy by this process for very long.
Scientists believe that the first organisms to appear on Earth's surface were anaerobic organisms. Those organisms arose when Earth's atmosphere contained very little oxygen. They had to produce the energy they needed, therefore, by mechanisms that did not require oxygen. As the composition of Earth's atmosphere changed to include more oxygen, organisms evolved to adapt to that condition.


Friday, June 14, 2013

Biotech and Research Club Proposed Projects

We are grateful for the enthusiasm you showed while selecting groups you were planning to work with last week.
We called for a general meeting but unfortunately the turn up was not really good. Therefore we would like to take this opportunity to inform you what we wanted you to know in that meeting.
The Biotech and Research Club came up with an idea of a total of four projects;
  1.   Aquaponics
  2.   Bag Gardening
  3.   Mushroom Cultivation
  4.   Ecology of Kyambogo Universitiy, Uganda
These projects were selected out of the many because are in line with the Objectives and Vision of the club.
Briefly this is what these projects are;
Aquaponics:
This is a combination of two agriculture methods to create an altogether superior and environmentally friendly way of growing your own organic food. Aquaponics is a method which uses the combination of aquaculture- the growing of fishes, and hydroponics- the method of growing plants without using soil. The combination of the two yields an organic gardening system that provides fresh plants, vegetables and fish for food.
Research has shown that aquaponically grown plants mature two times faster than those grown on soil.
Bag Gardening:
This an activity of growing plants in a sack. The bags are filled with soil, manure and stones in a systematic order.
Seedlings of vegetables like Irish potatoes, onions, carrots are planted in each of the sacks both on top and around the sack.
After planting the seedlings, they are watered to harvesting time.
Mushroom cultivation:
Here we will be trying to imitate the natural conditions under which mushrooms grow such that we can grow them artificially. This project contains a lot of microbiology which will help us to apply what we have learnt for example culturing of mushroom spawn, sterilization and so on.
Ecology of Kyambogo:
Research has shown that there is no record on any aspect of the Ecology of Kyambogo. Therefore we as the Biotech and Research Club have decided to take this opportunity of pioneering the initiative of studying and recording information about the ecology of our campus.
 We grouped the above projects into two as follows;
Group one we have;
1.      Aquaponics
2.      Bag Gardening
Group two we have;
1.      Mushroom Cultivation
2.      Ecology of Kyambogo
We will have leaders for each of these groups.
These are the qualities and qualifications required;
1.      Must be a student of BST/B or ODST/B
2.      Non-executive member of Biotech and Research Club
3.      Willing to lead others
4.      Dedicated to serve others
 To each of these groups we have attached a group of lecturers that will work with the groups as technical advisors.
Their names will be realised after they have accepted take on the responsibility

Saturday, June 08, 2013

Growing Bacteria in Petri Dishes

The steps below show to grow bacteria in a Petri dish

Image by Clker-Free-Vector-Images from Pixabay

Experiment

  1. You'll need a clean, microwave-safe container (a quart-sized bowl works great) to mix and heat the agar with water. These mixing proportions make enough nutrient agar to prepare two halves of the Petri dish. Mix 1/2 teaspoon agar (about 1.2 grams) with 1/4 cup (60 mL) of hot water and stir. Bring this mixture to a boil for one minute to completely dissolve the agar. CAUTION: Adult supervision is required to boil water. If you are using the microwave oven to boil the mixture, be careful not to let the solution boil over. The mixture should be clear with no particles floating around in the solution. Allow the mixture to cool for 3 to 5 minutes before moving on to the next step.
  2. Separate the Petri dish (there's a top and a bottom) and carefully fill the bottom half of the Petri dish with warm agar nutrient solution. Use the top half of the Petri dish to loosely cover the bottom portion (set the lid ajar to allow moisture to escape) and allow the solution to cool and harden for at least an hour.
  3. It's time to collect some bacteria on the end of a cotton swab. The classic test is to roll a clean cotton swab in your mouth and then to lightly draw a squiggle with it on the gelled agar. However, many people like to test something even more gross like the keys on your computer or the television remote control. Unless someone recently cleaned the buttons on the TV remote, you're in for some real YUCK in a few days.
  4. Consider all of your options below (or come up with your own) to collect samples. You might want to collect a sample from a computer keyboard for one half of the Petri dish and collect a sample from a door handle for the other half. Remember, you must use clean cotton swabs for each sample. In order to get a good sample collection, dampen the end of the cotton swab with water. Be sure to wipe the end of the cotton swab all over the surface to be tested to cover the end of the swab with invisible bacteria. Things that you might want to test: door handles, your hands, under your fingernails, your mouth, the top of a desk, computer keyboard, remote control, pencil or a pen, area around a bathroom sink, fax machine, calculator, cell phone, or your favorite toy.
  5. Lift the top off the Petri dish and LIGHTLY draw a squiggly line in the agar with the end of the cotton swab. Cover the Petri dish with the top half and use a piece of paper or tape to label the dish with the name of the item you tested. For your protection, place the sealed Petri dish inside a zipper-lock bag and seal it closed. For safety reasons, do not ever open the zipper-lock bag - you can view the growing bacteria through the clear plastic bag.
  6. Here's a clever test: Try placing a drop (no more) of hand sanitizing gel in the middle of one of your squiggles. Your hypothesis might be that the antibacterial chemical in hand sanitizer will keep any bacteria from growing. We'll see if you're right.
  7. Place the plates in a warm dark place to grow - not too warm, but anything up to about 98 degrees F (37 degrees C) should be fine. In a short time, you'll be greeted by an amazing variety of bacteria, molds, and fungi. You should continue to see more and larger colonies for the next few days, but you should not see any growth where the disinfectants (hand sanitizers) are. You might even see a "halo" around each spot where you placed the hand sanitizer. This halo is called the "kill zone" - measure and compare the size of the kill zone to determine the effectiveness of different antibacterial agents. Remember... Do not open the plates once things begin to grow. You could be culturing a pathogen.
  8. Remember not to open the zipper-lock bag... ever! When you're finished analyzing your growing bacteria, dispose of the entire bag in the trash.
Golly, Mom is right! It is important to wash your hands whenever you can! 

How Does It Work?

You're likely to have a huge variety of colors, shapes, and smells in your tiny worlds. Count the number of colonies on the plate, note the differences in color, shape, and other properties. Getting bacteria to grow can be a little tricky, so don't get discouraged if you have to make more than one attempt. Allow enough time for them to grow, too. You need millions of them in one place just to see them at all. They're really tiny! In a lab, you'd use your trusty inoculating loop to pick up a bit of the bacteria in order to create a slide for further study under a microscope.
Most bacteria collected in the environment will not be harmful. However, once they multiply into millions of colonies in a Petri dish they become more of a hazard. Be sure to protect open cuts with rubber gloves and never ingest or breathe in growing bacteria. Keep your Petri dishes sealed in the zipper-lock bags for the entire experiment. When you're finished with the experiment, some people recommend placing the Petri dish bag in a larger zipper-lock bag along with a few drops of bleach. Seal the larger bag and dispose of it in the trash.

Additional Info

Science Fair Connection:
Just growing bacteria in a Petri dish is not a science fair experiment. Yes, it is gross and cool and fascinating, but it doesn't meet the requirements of a science fair project. If you want to do a science fair project about germs, you have to add a variable, or something that changes in the experiment.
  • In the Growing Bacteria activity described above, adding an anti-bacterial hand sanitizer is a variable. Make one dish of germs and one dish of germs with a drop of the anti-bacterial sanitizer or, better yet, make three dishes--one as the control (just germs), one with an anti-bacterial sanitizer, and a third dish with another brand of anti-bacterial sanitizer. Then you can see which anti-bacterial sanitizer is more effective in killing germs. Just make sure that all three Petri dishes have germs from the same place in your home or classroom so that you know they are all exposed to the same bacteria. They also need to be grown in the same warm, dark place for the same amount of time so that the conditions are standardized as much as possible.
Growing Bacteria is such a popular activity that we've written it up as a sample science fair project (see the link below). The sample project describes the swabbing technique to collect the germs and gives you lots of helpful hints about growing bacteria. It makes suggestions about variables and gives you some ideas to make the project your own. What it doesn't give you is the data. What fun would that be? Don't you want to do the experiment for yourself and see what discoveries you make?
If you want to do a science fair project on germs, check out the Growing Bacteria science fair project.

Thursday, April 18, 2013

BIOTECH AND RESEARCH CLUB ELECTORAL COMMISSION LIST OF LEADERS FOR THE ACADEMIC YEAR 2013/2014



No
`POST
OFFICE
1.
PRESIDENT

SENDEGE ANDREW
2.
VICE PRESIDENT
UWERA CAROLINE
3.
SPEAKER
KIKUBO ABSOLOM
4.
GENERAL SECRETARY
NALULE HABIBAH
5.
ORGANISING SECRETARY
KIGAMBO MONICA
6.
ASSIST- ORGANISING SECRETARY
NAKASUJJA FLORENCE
7.
PROJECTS CORDINATOR
WILOBO GEORGE WILLIAM
8.
ASSIST- PROJECTS CORDINATOR
TENYWA WILSON
9.
PUBLICITY SECRETARY
TWINAMATSIKO WILBERFORCE
10.
FINANCIAL MANAGER
TUMUKUNDE BRUNO
11.
EVENING CO-ORDINATOR
KYEBOGOLA TONY

SPECIAL APPOINTMENTS
12.
GENERAL DUTIES
KAMUGISHA CHRISTOPHER
13.
ASSIST - PUBLICITY SECRETARY
CHRISPUS ONGODIA
14.
SALES AND COST MANAGER
BAKAIRA SPC


                                          

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